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xgboost R 패키지를 0.4-4에서 최신 CRAN 버전으로 업데이트하고 싶습니다. 그것은 그 xgboost_assert.c가 제대로 컴파일되지만 명령은 .CC이 잘못 * 파일을 컴파일하는 데 사용 보인다xgboost R 패키지 설치가 실패합니다.
installing *source* package 'xgboost' ...
** package 'xgboost' successfully unpacked and MD5 sums checked
configure: creating ./config.status
config.status: creating src/Makevars
** libs
I/usr/lib64/microsoft-r/3.3/lib64/R/include -DNDEBUG -I./include -I./dmlc-core/include -I./rabit/include -I. -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=0 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -DXGBOOST_CUSTOMIZE_LOGGER=1 -DRABIT_CUSTOMIZE_MSG_ -DRABIT_STRICT_CXX98_ -DU_STATIC_IMPLEMENTATION -fopenmp -c xgboost_R.cc -o xgboost_R.o
sh: I/usr/lib64/microsoft-r/3.3/lib64/R/include: No such file or directory
/usr/lib64/microsoft-r/3.3/lib64/R/etc/Makeconf:139: recipe for target 'xgboost_R.o' failed
make: [xgboost_R.o] Error 127 (ignored)
I/usr/lib64/microsoft-r/3.3/lib64/R/include -DNDEBUG -I./include -I./dmlc-core/include -I./rabit/include -I. -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=0 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -DXGBOOST_CUSTOMIZE_LOGGER=1 -DRABIT_CUSTOMIZE_MSG_ -DRABIT_STRICT_CXX98_ -DU_STATIC_IMPLEMENTATION -fopenmp -c xgboost_custom.cc -o xgboost_custom.o
sh: I/usr/lib64/microsoft-r/3.3/lib64/R/include: No such file or directory
/usr/lib64/microsoft-r/3.3/lib64/R/etc/Makeconf:139: recipe for target 'xgboost_custom.o' failed
make: [xgboost_custom.o] Error 127 (ignored)
gcc -std=gnu99 -I/usr/lib64/microsoft-r/3.3/lib64/R/include -DNDEBUG -I./include -I./dmlc-core/include -I./rabit/include -I. -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=0 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -DXGBOOST_CUSTOMIZE_LOGGER=1 -DRABIT_CUSTOMIZE_MSG_ -DRABIT_STRICT_CXX98_ -DU_STATIC_IMPLEMENTATION -fpic -DU_STATIC_IMPLEMENTATION -O2 -g -c xgboost_assert.c -o xgboost_assert.o
I/usr/lib64/microsoft-r/3.3/lib64/R/include -DNDEBUG -I./include -I./dmlc-core/include -I./rabit/include -I. -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=0 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -DXGBOOST_CUSTOMIZE_LOGGER=1 -DRABIT_CUSTOMIZE_MSG_ -DRABIT_STRICT_CXX98_ -DU_STATIC_IMPLEMENTATION -fopenmp -c amalgamation/xgboost-all0.cc -o amalgamation/xgboost-all0.o
sh: I/usr/lib64/microsoft-r/3.3/lib64/R/include: No such file or directory
/usr/lib64/microsoft-r/3.3/lib64/R/etc/Makeconf:139: recipe for target 'amalgamation/xgboost-all0.o' failed
make: [amalgamation/xgboost-all0.o] Error 127 (ignored)
I/usr/lib64/microsoft-r/3.3/lib64/R/include -DNDEBUG -I./include -I./dmlc-core/include -I./rabit/include -I. -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=0 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -DXGBOOST_CUSTOMIZE_LOGGER=1 -DRABIT_CUSTOMIZE_MSG_ -DRABIT_STRICT_CXX98_ -DU_STATIC_IMPLEMENTATION -fopenmp -c amalgamation/dmlc-minimum0.cc -o amalgamation/dmlc-minimum0.o
sh: I/usr/lib64/microsoft-r/3.3/lib64/R/include: No such file or directory
/usr/lib64/microsoft-r/3.3/lib64/R/etc/Makeconf:139: recipe for target 'amalgamation/dmlc-minimum0.o' failed
make: [amalgamation/dmlc-minimum0.o] Error 127 (ignored)
I/usr/lib64/microsoft-r/3.3/lib64/R/include -DNDEBUG -I./include -I./dmlc-core/include -I./rabit/include -I. -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=0 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -DXGBOOST_CUSTOMIZE_LOGGER=1 -DRABIT_CUSTOMIZE_MSG_ -DRABIT_STRICT_CXX98_ -DU_STATIC_IMPLEMENTATION -fopenmp -c rabit/src/engine_empty.cc -o rabit/src/engine_empty.o
sh: I/usr/lib64/microsoft-r/3.3/lib64/R/include: No such file or directory
/usr/lib64/microsoft-r/3.3/lib64/R/etc/Makeconf:139: recipe for target 'rabit/src/engine_empty.o' failed
make: [rabit/src/engine_empty.o] Error 127 (ignored)
I/usr/lib64/microsoft-r/3.3/lib64/R/include -DNDEBUG -I./include -I./dmlc-core/include -I./rabit/include -I. -DXGBOOST_STRICT_R_MODE=1 -DDMLC_LOG_BEFORE_THROW=0 -DDMLC_ENABLE_STD_THREAD=0 -DDMLC_DISABLE_STDIN=1 -DDMLC_LOG_CUSTOMIZE=1 -DXGBOOST_CUSTOMIZE_LOGGER=1 -DRABIT_CUSTOMIZE_MSG_ -DRABIT_STRICT_CXX98_ -DU_STATIC_IMPLEMENTATION -fopenmp -c rabit/src/c_api.cc -o rabit/src/c_api.o
sh: I/usr/lib64/microsoft-r/3.3/lib64/R/include: No such file or directory
/usr/lib64/microsoft-r/3.3/lib64/R/etc/Makeconf:139: recipe for target 'rabit/src/c_api.o' failed
make: [rabit/src/c_api.o] Error 127 (ignored)
-shared -L/usr/lib64/microsoft-r/3.3/lib64/R/lib -o xgboost.so ./xgboost_R.o ./xgboost_custom.o ./xgboost_assert.o ./amalgamation/xgboost-all0.o ./amalgamation/dmlc-minimum0.o ./rabit/src/engine_empty.o ./rabit/src/c_api.o -fopenmp -L/usr/lib64/microsoft-r/3.3/lib64/R/lib -lR
sh: line 2: -shared: command not found
/usr/lib64/microsoft-r/3.3/lib64/R/share/make/shlib.mk:6: recipe for target 'xgboost.so' failed
make: *** [xgboost.so] Error 127
ERROR: compilation failed for package 'xgboost'
* removing '/home/norbert/R/x86_64-pc-linux-gnu-library/3.3/xgboost'
* restoring previous '/home/norbert/R/x86_64-pc-linux-gnu-library/3.3/xgboost'
Warning in install.packages :
installation of package ‘xgboost’ had non-zero exit status
The downloaded source packages are in
‘/tmp/RtmpvbYF34/downloaded_packages’
다음과 같은 메시지에
options(repos = c(CRAN = "https://mran.microsoft.com/snapshot/2017-01-19"))
install.packages("xgboost")
결과 설치를 시작 - 명령의 시작을 누락. 최종 링크 명령에서도 마찬가지입니다.
sessionInfo()
R version 3.3.2 (2016-10-31)
Platform: x86_64-pc-linux-gnu (64-bit)
Running under: Ubuntu 16.04.1 LTS
locale:
[1] LC_CTYPE=pl_PL.UTF-8 LC_NUMERIC=C LC_TIME=pl_PL.UTF-8 LC_COLLATE=pl_PL.UTF-8
[5] LC_MONETARY=pl_PL.UTF-8 LC_MESSAGES=pl_PL.UTF-8 LC_PAPER=pl_PL.UTF-8 LC_NAME=C
[9] LC_ADDRESS=C LC_TELEPHONE=C LC_MEASUREMENT=pl_PL.UTF-8 LC_IDENTIFICATION=C
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] RevoUtilsMath_10.0.0
loaded via a namespace (and not attached):
[1] RevoUtils_10.0.2 tools_3.3.2
무엇을해야할까요?
왜 돈이 추가 "진짜"CRAN 저장소 (https : //cran.r-proje)에서 설치하지 마십시오. ct.org/package=xgboost)? 현재 XGBoost 0.6-4를 사용할 수 있습니다. – user1808924
@ user1808924 : 도움이되지 않습니다. 정확히 같은 결과. – Norbert
'R 버전 3.3.1 (2016-06-21) \ 플랫폼 : x86_64-redhat-linux-gnu (64-bit) \ Running 아래 : Fedora 23 (20 세)'으로 정식으로 구축 된 공식 패키지입니다. 환경에 누락 된 빌드 도구가있을 수 있습니까? – user1808924